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ASM289641v1

Organism name:
Gopherus agassizii (Agassiz's desert tortoise)
Sex:
male
BioSample:
SAMN05991319
BioProject:
PRJNA352726
Submitter:
Arizona State University
Date:
2018/01/24
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_002896415.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
PPEB01
Assembly method:
SOAPdenovo v. JUNE-2015
Expected final version:
no
Genome coverage:
118.0x
Sequencing technology:
Illumina HiSeq

IDs: 1532551 [UID] 5927438 [GenBank]

See Genome Information for Gopherus agassizii

History (Show revision history)

Global statistics

Total sequence length2,184,966,080
Total ungapped length2,152,443,990
Gaps between scaffolds0
Number of scaffolds172,559
Scaffold N50228,109
Scaffold L502,740
Number of contigs255,430
Contig N5043,735
Contig L5014,432
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)172,559

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All2,184,966,080172,5592,152,443,990228,10982,8710
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