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ASM285057v1

Organism name:
Enterobacter cancerogenus (enterobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: CR-Eb1
BioSample:
SAMN08107552
BioProject:
PRJNA420145
Submitter:
Korea Research Institute of Bioscience and Biotechnology (KRIBB)
Date:
2018/01/03
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
GenBank assembly accession:
GCA_002850575.1 (latest)
RefSeq assembly accession:
GCF_002850575.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
Assembly method:
HGAP v. 2 (smrtanalysis_2.3.0)
Expected final version:
yes
Genome coverage:
90.67x
Sequencing technology:
PacBio

IDs: 1504881 [UID] 5829268 [GenBank] 5857358 [RefSeq]

See Genome Information for Enterobacter cancerogenus

There are 35 assemblies for this organism

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History (Show revision history)

Comment

The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::11/30/2023 13:54:19
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::4,493
CDSs (total)::4,377
Genes (coding)::4,339
CDSs (with protein)::4,339
Genes (RNA)::116
rRNAs::9, 8, 8 (5S, 16S, 23S)
complete rRNAs::9, 8, 8 (5S, 16S, 23S)
tRNAs::85
ncRNAs::6
Pseudo Genes (total)::38
CDSs (without protein)::38
Pseudo Genes (ambiguous residues)::0 of 38
Pseudo Genes (frameshifted)::19 of 38
Pseudo Genes (incomplete)::22 of 38
Pseudo Genes (internal stop)::9 of 38
Pseudo Genes (multiple problems)::9 of 38
Pseudo Genes (short protein)::1 of 38
CRISPR Arrays::2
##Genome-Annotation-Data-END##

Global statistics

Total sequence length4,796,512
Total ungapped length4,796,512
Total number of chromosomes and plasmids1

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_002850585.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP025225.1=NZ_CP025225.1

Assembly statistics

MoleculeTotal
Length
Chromosome 4,796,512

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Enterobacter cancerogenusEnterobacter cancerogenus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_019047785.1Enterobacter cancerogenustype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_019047785.1Enterobacter cancerogenustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.9393.7693.27
Best-match type98.9393.7693.27

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna