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ASM284483v1

Organism name:
Dicerorhinus sumatrensis sumatrensis (Sumatran rhinoceros)
Infraspecific name:
Ecotype: Sumatra
Isolate:
Ipuh
BioSample:
SAMN07833945
BioProject:
PRJNA415733
Submitter:
Marshall University Genomic Core Facility
Date:
2017/12/19
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_002844835.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
PEKH01
Assembly method:
SOAPdenovo2 v. 2.04
Expected final version:
yes
Genome coverage:
46.0x
Sequencing technology:
Illumina HiSeq

IDs: 1492851 [UID] 5797828 [GenBank]

See Genome Information for Dicerorhinus sumatrensis

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,949,863,658
Total ungapped length2,820,084,081
Gaps between scaffolds0
Number of scaffolds1,061,589
Scaffold N50614,498
Scaffold L501,268
Number of contigs1,110,756
Contig N5089,455
Contig L508,673
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)1,061,589

Supplemental Content

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,949,847,6561,061,5872,820,082,757614,49849,1650
MoleculeSequence RoleTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
Mitochondrion MTAllAssembled moleculeUnlocalized scaffolds16,002016,0022021,32401,32410,744010,744202000
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