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Source database (GenBank or RefSeq) File type

ASM283866v1

Organism name:: Bifidobacterium breve (high G+C Gram-positive bacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: NRBB27
BioSample:: SAMN07160976
BioProject:: PRJNA387692
Submitter:: University College Cork
Date:: 2017/12/13
Assembly type:: na
Assembly level:: Complete Genome
Genome representation:: full
GenBank assembly accession:: GCA_002838665.1 (latest)
RefSeq assembly accession:: GCF_002838665.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
Assembly method:: SMRT Analysis v. Jan 2016
Expected final version:: yes
Genome coverage:: 147.0x
Sequencing technology:: PacBio

IDs: 1489741 [UID] 5777618 [GenBank] 6300518 [RefSeq]

See Genome Information for Bifidobacterium breve

Pathogen Detection Resources

There are 604 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_002838665.1	=	GCF_002838665.1	ASM283866v1	Complete Genome	Latest GenBank, Latest RefSeq

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeq
Annotation Date::02/19/2024 01:34:43
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::1,978
CDSs (total)::1,916
Genes (coding)::1,841
CDSs (with protein)::1,841
Genes (RNA)::62
rRNAs::2, 2, 2 (5S, 16S, 23S)
complete rRNAs::2, 2, 2 (5S, 16S, 23S)
tRNAs::53
ncRNAs::3
Pseudo Genes (total)::75
CDSs (without protein)::75
Pseudo Genes (ambiguous residues)::0 of 75
Pseudo Genes (frameshifted)::33 of 75
Pseudo Genes (incomplete)::50 of 75
Pseudo Genes (internal stop)::6 of 75
Pseudo Genes (multiple problems)::14 of 75
CRISPR Arrays::2
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	2,289,838
Total ungapped length	2,289,838
Total number of chromosomes and plasmids	1

	ANI	Query coverage	Subject coverage
Declared type	99.00	88.81	89.61
Best-match type	99.00	88.81	89.61

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ASM283866v1

See Genome Information for Bifidobacterium breve

Pathogen Detection Resources

There are 604 assemblies for this organism

History (Show revision history)

Comment

Genome-Annotation-Data

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