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Pmar_germline 1.0

Description:
Petromyzon marinus germline 1.0
Organism name:
Petromyzon marinus (sea lamprey)
Infraspecific name:
Ecotype: Ocean Run
Isolate:
W1
Sex:
male
BioSample:
SAMN06131802
BioProject:
PRJNA357048
Submitter:
University of Kentucky
Date:
2017/12/11
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_002833325.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
PIZI01
Assembly method:
DBG2OLC v. February-2015
Expected final version:
yes
Genome coverage:
100.0x
Sequencing technology:
Illumina; PacBio

IDs: 1474531 [UID] 5740688 [GenBank]

See Genome Information for Petromyzon marinus

There are 2 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length1,130,417,696
Total ungapped length1,043,165,711
Gaps between scaffolds0
Number of scaffolds12,061
Scaffold N5011,932,523
Scaffold L5034
Number of contigs24,392
Contig N50170,712
Contig L501,431
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)12,061

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All1,130,417,69612,0611,043,165,71111,932,52312,3310
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