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ASM278645v2

Organism name:
Moraxella osloensis (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: TT16
BioSample:
SAMN07498009
BioProject:
PRJNA397939
Submitter:
Changwon National University
Date:
2017/11/30
Assembly type:
na
Release type:
minor
Assembly level:
Complete Genome
Genome representation:
full
GenBank assembly accession:
GCA_002786455.2 (latest)
RefSeq assembly accession:
GCF_002786455.2 (latest)
RefSeq assembly and GenBank assembly identical:
yes
Assembly method:
SMRTpipe HGAP v. 3.0
Expected final version:
yes
Genome coverage:
220.0x
Sequencing technology:
PacBio

IDs: 1455471 [UID] 5692028 [GenBank] 5703578 [RefSeq]

See Genome Information for Moraxella osloensis

Pathogen Detection Resources

There are 50 assemblies for this organism

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History (Show revision history)

Comment

The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
Bacteria and source DNA available from Prof Kyoung Lee, Changwon National University.

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::11/27/2023 22:41:14
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::2,513
CDSs (total)::2,450
Genes (coding)::2,392
CDSs (with protein)::2,392
Genes (RNA)::63
rRNAs::4, 4, 4 (5S, 16S, 23S)
complete rRNAs::4, 4, 4 (5S, 16S, 23S)
tRNAs::47
ncRNAs::4
Pseudo Genes (total)::58
CDSs (without protein)::58
Pseudo Genes (ambiguous residues)::0 of 58
Pseudo Genes (frameshifted)::16 of 58
Pseudo Genes (incomplete)::44 of 58
Pseudo Genes (internal stop)::11 of 58
Pseudo Genes (multiple problems)::10 of 58
CRISPR Arrays::4
##Genome-Annotation-Data-END##

Global statistics

Total sequence length2,818,011
Total ungapped length2,818,011
Total number of chromosomes and plasmids5

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_002786485.2)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP024185.2=NZ_CP024185.2
Plasmid p1CP024186.1=NZ_CP024186.1
Plasmid p2CP024187.1=NZ_CP024187.1
Plasmid p3CP024188.1=NZ_CP024188.1
Plasmid p4CP024189.1=NZ_CP024189.1

Assembly statistics

MoleculeTotal
Length
All2,818,011
Chromosome 2,575,094
Plasmid p1105,718
Plasmid p258,284
Plasmid p342,981
Plasmid p435,934

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Moraxella osloensisMoraxella osloensis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_001553955.1Moraxella osloensistype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_001553955.1Moraxella osloensistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type95.0380.8686.01
Best-match type95.0380.8686.01

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna