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ASM237266v1

Organism name:
Anaerovibrio lipolyticus (firmicutes)
Taxonomy check:
Inconclusive
Isolate:
UBA3726
BioSample:
SAMN06452518
BioProject:
PRJNA348753
Submitter:
University of Queensland
Date:
2017/09/26
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
GenBank assembly accession:
GCA_002372665.1 (latest)
RefSeq assembly accession:
GCF_002372665.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
DFHJ01
Assembly method:
CLC de novo assembler v. 4.4.1
Expected final version:
yes
Genome coverage:
30.3x
Sequencing technology:
Illumina

IDs: 1234731 [UID] 5105648 [GenBank] 45844158 [RefSeq]

See Genome Information for Anaerovibrio lipolyticus

There are 9 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,043,890
Total ungapped length2,038,382
Gaps between scaffolds0
Number of scaffolds143
Scaffold N5018,778
Scaffold L5033
Number of contigs190
Contig N5015,451
Contig L5044
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)143

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,043,8901432,038,38218,778470

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Anaerovibrio lipolyticusAnaerovibrio lipolyticus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000803025.1Anaerovibrio lipolyticussuspected-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000803025.1Anaerovibrio lipolyticussuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type94.5186.9562.66
Best-match type94.5186.9562.66

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-matchna