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ASM230400v1

Organism name:
Flavobacterium sp. ACN6 (CFB group bacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: ACN6
BioSample:
SAMN05967353
BioProject:
PRJNA341585
Submitter:
Georg-August-University Goettingen, Genomic and Applied Microbiology, Goettingen Genomics Laboratory
Date:
2017/09/15
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_002304005.1 (latest)
RefSeq assembly accession:
GCF_002304005.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
MRCQ01
Assembly method:
SPAdes v. 3.9.0
Expected final version:
yes
Genome coverage:
120.4x
Sequencing technology:
Illumina MiSeq

IDs: 1198511 [UID] 5015258 [GenBank] 5021968 [RefSeq]

See Genome Information for Flavobacterium sp. ACN6

Pathogen Detection Resources

History (Show revision history)

Comment

Bacteria and source DNA available from Georg-August-University Goettingen, Genomic and Applied Microbiology & Goettingen Genomics Laboratory.

Global statistics

Total sequence length5,127,275
Total ungapped length5,127,275
Number of contigs45
Contig N50343,670
Contig L506
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)45

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced5,127,275455,127,275343,67000

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Flavobacterium sp. ACN6Flavobacterium sp. ACN6

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_003312915.1Flavobacterium fluvialetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type88.3670.1474.31

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna