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ASM221593v1

Organism name:
Psammomys obesus (fat sand rat)
Isolate:
Psa_ob012049795
Sex:
male
BioSample:
SAMN06061930
BioProject:
PRJNA355058
Submitter:
Department of Zoology, University of Oxford, UK
Date:
2017/07/07
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_002215935.1 (replaced)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
NESX01
Assembly method:
SOAPdenovo2 v. 2.21
Genome coverage:
87.6x
Sequencing technology:
Illumina HiSeq2000

IDs: 1151651 [UID] 4676748 [GenBank]

See Genome Information for Psammomys obesus

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,311,471,749
Total ungapped length2,311,471,749
Number of contigs96,427
Contig N5076,398
Contig L508,752
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)96,427

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PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,311,471,74996,4272,311,471,74976,39800
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