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ASM209165v1

Organism name:: Pseudomonas jinjuensis NBRC 103047 (g-proteobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: NBRC 103047
BioSample:: SAMD00046929
BioProject:: PRJDB213
Submitter:: National Institute of Technology and Evaluation
Date:: 2017/04/03
Assembly type:: na
Assembly level:: Contig
Genome representation:: full
Relation to type material:: assembly from type material
GenBank assembly accession:: GCA_002091655.1 (latest)
RefSeq assembly accession:: GCF_002091655.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: BDAD01
Assembly method:: newbler v. 3.0
Genome coverage:: 101x
Sequencing technology:: 454 GS-FLX Titanium; Illumina HiSeq 1000

IDs: 1070781 [UID] 4367348 [GenBank] 4374508 [RefSeq]

See Genome Information for Pseudomonas jinjuensis

Pathogen Detection Resources

There are 2 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_002091655.1	=	GCF_002091655.1	ASM209165v1	Contig	Latest GenBank, Latest RefSeq

Comment



Strain NBRC 103047 available from NBRC culture collection (http://www.nite.go.jp/en/nbrc/index.html).

The NBRC Whole Genome Shotgun Project aims to provide "reference genomes" of NBRC culture collection strains for identifying useful genes for taxonomic classification, risk/safety assessment, and industrial application, and for understanding ... the structure and evolution of microbial genomes.
(http://www.nite.go.jp/en/nbrc/genome/project/wgs/ project_wgs2.html)  more

Global statistics

Total sequence length	5,862,287
Total ungapped length	5,862,287
Number of contigs	48
Contig N50	185,158
Contig L50	12
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	48

	ANI	Query coverage	Subject coverage
Declared type	99.99	99.83	99.74
Best-match type	99.99	99.83	99.74

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ASM209165v1

See Genome Information for Pseudomonas jinjuensis

Pathogen Detection Resources

There are 2 assemblies for this organism

History (Show revision history)

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