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NIATT_ARIZONA

Organism name:
Patagioenas fasciata monilis (band-tailed pigeon)
Isolate:
BTP2013
Sex:
female
BioSample:
SAMN04386172
BioProject:
PRJNA308039
Submitter:
University of California, Santa Cruz
Date:
2017/03/15
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_002029285.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
LSYS01
Assembly method:
SOAPdenovo v. 1.05
Expected final version:
yes
Genome coverage:
18.0x
Sequencing technology:
Illumina HiSeq

IDs: 1025181 [UID] 4201618 [GenBank]

See Genome Information for Patagioenas fasciata

History (Show revision history)

Global statistics

Total sequence length1,089,149,042
Total assembly gap length16,246,789
Gaps between scaffolds0
Number of scaffolds9,784
Scaffold N5019,987,418
Scaffold L5017
Number of contigs148,377
Contig N5017,937
Contig L5016,931
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)9,784

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All1,089,149,0429,7841,072,902,25319,987,418138,5930
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