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CTBE_SP803280_v1.0

Organism name:
Saccharum hybrid cultivar SP80-3280 (sugarcane)
Infraspecific name:
Cultivar: SP80-3280
BioSample:
SAMN02727967
BioProject:
PRJNA272769
Submitter:
Centro Nacional de Pesquisa em Energia e Materiais
Date:
2017/03/03
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_002018215.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JXQF01
Assembly method:
Celera Assembler v. 8.2
Expected final version:
no
Genome coverage:
5.0x
Sequencing technology:
Illumina TruSeq Synthetic Long Reads; Illumina HiSeq

IDs: 1018991 [UID] 4174348 [GenBank]

See Genome Information for Saccharum hybrid cultivar

Pathogen Detection Resources

There are 4 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length1,169,948,913
Total ungapped length1,169,948,913
Number of contigs199,028
Contig N508,433
Contig L5041,528
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)199,028

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
All1,169,948,913199,0281,169,948,9138,43300
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