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ASM200744v1

Organism name:
Ailuropoda melanoleuca (giant panda)
Isolate:
Jingjing
Sex:
female
BioSample:
SAMN04193337
BioProject:
PRJNA299083
Submitter:
Institute of Zoology, Chinese Academy of Sciences
Date:
2017/02/28
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_002007445.1 (replaced)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
LNAT01
Assembly method:
SOAPdenovo v. 1.0
Expected final version:
yes
Genome coverage:
70.0x
Sequencing technology:
Illumina HiSeq

IDs: 1013301 [UID] 4161718 [GenBank]

See Genome Information for Ailuropoda melanoleuca

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,428,263,693
Total ungapped length2,381,612,787
Gaps between scaffolds0
Number of scaffolds57,414
Scaffold N509,947,519
Scaffold L5075
Number of contigs106,175
Contig N50128,604
Contig L505,279
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)57,414

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,428,263,69357,4142,381,612,7879,947,51948,7610
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