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ASM188883v1

  • Anomalous assembly.
Organism name:
Rhinolophus sinicus (Chinese rufous horseshoe bat)
Isolate:
Zhonghua_01
Sex:
male
BioSample:
SAMN04038064
BioProject:
PRJNA294852
Submitter:
SKLEC & IECR
Date:
2016/12/04
Assembly level:
Scaffold
Genome representation:
full
Assembly anomaly:
contaminated
Excluded from RefSeq:
  • contaminated
GenBank assembly accession:
GCA_001888835.1 (latest)
RefSeq assembly accession:
GCF_001888835.1 (suppressed)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LVEH01
Assembly method:
AllPaths v. July-2013
Expected final version:
yes
Genome coverage:
146.44x
Sequencing technology:
Illumina HiSeq

IDs: 904761 [UID] 3767068 [GenBank] 3846048 [RefSeq]

See Genome Information for Rhinolophus sinicus

History (Show revision history)

Comment

Global statistics

Total sequence length2,073,344,508
Total ungapped length2,015,329,797
Gaps between scaffolds0
Number of scaffolds63,439
Scaffold N503,754,400
Scaffold L50161
Number of contigs182,995
Contig N5037,803
Contig L5015,841
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)63,439

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,073,344,50863,4392,015,329,7973,754,400119,5560
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