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ASM188570v1

Organism name:
Streptomyces cinnamoneus (high G+C Gram-positive bacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: ATCC 12686
BioSample:
SAMN05945585
BioProject:
PRJNA350731
Submitter:
University of Illinois at Urbana-Champaign
Date:
2016/11/25
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • genome length too large
GenBank assembly accession:
GCA_001885705.1 (latest)
RefSeq assembly accession:
GCF_001885705.1 (suppressed)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
MOEP01
Assembly method:
ABySS v. May-2012
Expected final version:
yes
Genome coverage:
12.0x
Sequencing technology:
Illumina

IDs: 894051 [UID] 3743318 [GenBank] 3766768 [RefSeq]

See Genome Information for Streptomyces cinnamoneus

There are 4 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length11,006,533
Total ungapped length10,859,601
Gaps between scaffolds0
Number of scaffolds453
Scaffold N50117,185
Scaffold L5022
Number of contigs554
Contig N5078,910
Contig L5039
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)453

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced11,006,53345310,859,601117,1851010

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Streptomyces cinnamoneusStreptomyces cinnamoneus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_014650495.1Streptomyces cinnamoneustype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_014650495.1Streptomyces cinnamoneustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type89.0339.2159.77
Best-match type89.0339.2159.77

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-matchna