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ASM172377v1

Organism name:
Vigna angularis var. angularis (adzuki bean)
Infraspecific name:
Cultivar: Kyungwonpat
BioSample:
SAMN02870185
BioProject:
PRJNA253346
Submitter:
Seoul National University
Date:
2016/09/14
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_001723775.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JRFV01
Assembly method:
AllPaths v. 42179
Expected final version:
no
Genome coverage:
160.0x
Sequencing technology:
Illumina HiSeq

IDs: 794231 [UID] 3444898 [GenBank]

See Genome Information for Vigna angularis

There are 4 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length444,438,822
Total ungapped length399,138,682
Gaps between scaffolds0
Number of scaffolds3,387
Scaffold N508,174,047
Scaffold L5011
Number of contigs32,588
Contig N5026,637
Contig L504,339
Total number of chromosomes and plasmids11
Number of component sequences (WGS or clone)3,387

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_001724015.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1CM004624.1n/an/a0
Chromosome 2CM004625.1n/an/a0
Chromosome 3CM004626.1n/an/a0
Chromosome 4CM004627.1n/an/a0
Chromosome 5CM004628.1n/an/a0
Chromosome 6CM004629.1n/an/a0
Chromosome 7CM004630.1n/an/a0
Chromosome 8CM004631.1n/an/a0
Chromosome 9CM004632.1n/an/a0
Chromosome 10CM004633.1n/an/a0
Chromosome 11CM004634.1n/an/a0
unplacedn/an/an/a3,376

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All444,438,8223,387399,138,6828,174,04729,2010
Chromosome 130,162,567127,849,89830,162,5671,7000
Chromosome 228,275,151125,380,10428,275,1511,9340
Chromosome 324,887,298122,909,40824,887,2981,4060
Chromosome 427,369,118125,094,29127,369,1181,6000
Chromosome 511,046,820110,539,74611,046,8204950
Chromosome 637,529,183134,936,35237,529,1832,1070
Chromosome 79,421,02718,989,6099,421,0274360
Chromosome 812,916,979111,692,64512,916,9798760
Chromosome 913,257,377112,281,37013,257,3777100
Chromosome 107,719,22917,242,5667,719,2293890
Chromosome 1124,689,152123,079,88324,689,1521,2830
unplaced217,164,9213,376189,142,810633,90916,2650
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