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ASM169750v1

Organism name:
Neisseria meningitidis (b-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: M22811
BioSample:
SAMN04883392
BioProject:
PRJNA319252
Submitter:
Centers for Disease Control and Prevention
Date:
2016/08/02
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
GenBank assembly accession:
GCA_001697505.1 (latest)
RefSeq assembly accession:
GCF_001697505.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
Assembly method:
HGAP v. 3
Genome coverage:
242.01
Sequencing technology:
PacBio

IDs: 776951 [UID] 3370438 [GenBank] 3371628 [RefSeq]

See Genome Information for Neisseria meningitidis

There are 8126 assemblies for this organism

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History (Show revision history)

Comment

The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
Bacteria are from the culture collection of the Bacterial Meningitis Lab at the Centers for Disease Control and Prevention (CDC).

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::03/04/2024 12:17:00
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::2,163
CDSs (total)::2,088
Genes (coding)::1,951
CDSs (with protein)::1,951
Genes (RNA)::75
rRNAs::4, 4, 4 (5S, 16S, 23S)
complete rRNAs::4, 4, 4 (5S, 16S, 23S)
tRNAs::59
ncRNAs::4
Pseudo Genes (total)::137
CDSs (without protein)::137
Pseudo Genes (ambiguous residues)::0 of 137
Pseudo Genes (frameshifted)::58 of 137
Pseudo Genes (incomplete)::93 of 137
Pseudo Genes (internal stop)::17 of 137
Pseudo Genes (multiple problems)::26 of 137
CRISPR Arrays::2
##Genome-Annotation-Data-END##

Global statistics

Total sequence length2,185,698
Total ungapped length2,185,698
Total number of chromosomes and plasmids1

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_001697515.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP016654.1=NZ_CP016654.1

Assembly statistics

MoleculeTotal
Length
Chromosome 2,185,698

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Neisseria meningitidisNeisseria meningitidis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_900638555.1Neisseria meningitidistype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_900638555.1Neisseria meningitidistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type97.3791.9691.94
Best-match type97.3791.9691.94

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna