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ASM166083v1

Organism name:
Okapia johnstoni (okapi)
Isolate:
WOAK
Sex:
male
BioSample:
SAMN04526128
BioProject:
PRJNA313910
Submitter:
Pennsylvania State University
Date:
2016/06/08
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_001660835.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
LVCL01
Assembly method:
SOAPdenovo v. MAY-2014
Genome coverage:
30.0x
Sequencing technology:
Illumina HiSeq

IDs: 754801 [UID] 3291628 [GenBank]

See Genome Information for Okapia johnstoni

There are 3 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,878,133,036
Total ungapped length2,738,624,213
Gaps between scaffolds0
Number of scaffolds837,179
Scaffold N50111,538
Scaffold L506,512
Number of contigs925,548
Contig N5039,571
Contig L5018,817
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)837,179

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,878,133,036837,1792,738,624,213111,53888,3690
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