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ASM165405v1

Organism name:
Hevea brasiliensis (rubber tree)
Infraspecific name:
Cultivar: reyan7-33-97
BioSample:
SAMN04451765
BioProject:
PRJNA310386
Submitter:
Rubber Research Institute
Date:
2016/06/01
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_001654055.1 (latest)
RefSeq assembly accession:
GCF_001654055.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome Pltd (in non-nuclear assembly-unit)
  • Data displayed for RefSeq version
WGS Project:
LVXX01
Assembly method:
SOAPdenovo v. 1.1
Expected final version:
yes
Reference guided assembly:
de-novo
Genome coverage:
99.0x
Sequencing technology:
Illumina HiSeq

IDs: 751381 [UID] 3282278 [GenBank] 4681368 [RefSeq]

See Genome Information for Hevea brasiliensis

There are 4 assemblies for this organism

See more

History (Show revision history)

Global statistics

Total sequence length1,373,527,118
Total assembly gap length79,796,327
Gaps between scaffolds0
Number of scaffolds7,453
Scaffold N501,281,786
Scaffold L50320
Number of contigs48,315
Contig N5060,046
Contig L506,073
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)7,453

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,373,365,9277,4521,293,569,6001,281,78640,8620
MoleculeTotal
Length
Chloroplast Pltd161,191
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