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JCM_1462_assembly_v001

Organism name:
Cutaneotrichosporon cutaneum (basidiomycete fungi)
Infraspecific name:
Strain: JCM 1462
BioSample:
SAMD00031920
BioProject:
PRJDB3729
Submitter:
RIKEN Center for Life Science Technologies, Division of Genomic Technologies
Date:
2016/03/01
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly designated as neotype
GenBank assembly accession:
GCA_001600715.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
BCKU01
Assembly method:
ALLPATHS-LG v. 52488
Genome coverage:
283x
Sequencing technology:
HiSeq 2500

IDs: 710811 [UID] 3144378 [GenBank]

See Genome Information for Cutaneotrichosporon cutaneum

There are 3 assemblies for this organism

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History (Show revision history)

Comment

We perform genome sequencing of the important 100 eukaryotic microorganisms for the promotion of various studies. Genome sequenced microbial strains and genome DNA are available from RIKEN BRC-JCM.
http://www.jcm.riken.jp/cgi-bin/jcm/jcm_number?JCM=1462 Japan Collection of Microorganisms, RIKEN BioResource Center, 3-1-1 Koyadai, Tsukuba, Ibaraki ... 305-0074, Japan

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Global statistics

Total sequence length23,155,501
Total ungapped length22,759,723
Gaps between scaffolds0
Number of scaffolds98
Scaffold N50744,446
Scaffold L5011
Number of contigs419
Contig N50110,385
Contig L5060
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)98

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced23,155,5019822,759,723744,4463210
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