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ASM155707v1

Organism name:
Methylobacterium sp. CCH7-A2 (a-proteobacteria)
Taxonomy check:
Inconclusive
Infraspecific name:
Strain: CCH7-A2
BioSample:
SAMN04299490
BioProject:
PRJNA299404
Submitter:
U.S. Environmental Protection Agency
Date:
2016/02/10
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_001557075.1 (latest)
RefSeq assembly accession:
GCF_001557075.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LSKN01
Assembly method:
SPAdes v. 3.5
Genome coverage:
5x
Sequencing technology:
Illumina HiSeq

IDs: 639911 [UID] 2872428 [GenBank] 3398268 [RefSeq]

See Genome Information for Methylobacterium sp. CCH7-A2

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

Total sequence length5,157,057
Total ungapped length5,157,057
Number of contigs331
Contig N5056,856
Contig L5026
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)331

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced5,157,0573315,157,05756,85600

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Methylobacterium sp. CCH7-A2Methylobacterium sp. CCH7-A2

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_001741865.1Bosea vaviloviaetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type83.9940.7931.34

ANI result

Taxonomy check statusBest match statusComment
Inconclusivebelow-threshold-mismatchna