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Source database (GenBank or RefSeq) File type

ASM155229v1

Organism name:: Globicatella sanguinis NBRC 15551 (firmicutes)
Taxonomy check:: OK
Infraspecific name:: Strain: NBRC 15551
BioSample:: SAMD00046317
BioProject:: PRJDB419
Submitter:: National Institute of Technology and Evaluation
Date:: 2016/02/03
Assembly type:: na
Assembly level:: Contig
Genome representation:: full
Relation to type material:: assembly from type material
GenBank assembly accession:: GCA_001552295.1 (latest)
RefSeq assembly accession:: GCF_001552295.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: BCQX01
Assembly method:: newbler v. 3.0
Genome coverage:: 166x
Sequencing technology:: Illumina HiSeq 1000

IDs: 637491 [UID] 2866838 [GenBank] 3389918 [RefSeq]

See Genome Information for Globicatella sanguinis

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_001552295.1	=	GCF_001552295.1	ASM155229v1	Contig	Latest GenBank, Latest RefSeq

Comment



Strain NBRC 15551 available from NBRC culture collection (http://www.nite.go.jp/en/nbrc/index.html).

The NBRC Whole Genome Shotgun Project aims to provide "reference genomes" of NBRC culture collection strains for identifying useful genes for taxonomic classification, risk/safety assessment, and industrial application, and for understanding ... the structure and evolution of microbial genomes.
(http://www.nite.go.jp/en/nbrc/genome/project/wgs/ project_wgs2.html)  more

Global statistics

Total sequence length	2,327,754
Total ungapped length	2,327,754
Number of contigs	256
Contig N50	17,976
Contig L50	46
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	256

	ANI	Query coverage	Subject coverage
Declared type	na	na	na
Best-match type	95.09	76.36	80.28

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ASM155229v1

See Genome Information for Globicatella sanguinis

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

Comment

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Average Nucleotide Identity (ANI) data

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