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Source database (GenBank or RefSeq) File type

ASM144444v1

Organism name:: Hoylesella enoeca (CFB group bacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: F0113
BioSample:: SAMN04260158
BioProject:: PRJNA282954
Submitter:: The Forsyth Institute
Date:: 2015/11/17
Assembly type:: na
Assembly level:: Complete Genome
Genome representation:: full
RefSeq category:: representative genome
GenBank assembly accession:: GCA_001444445.1 (latest)
RefSeq assembly accession:: GCF_001444445.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
Assembly method:: SMRT Analysis RS_HGAP_Assembly.2 v. 2.3.0.140936.p4.150482
Genome coverage:: 366x
Sequencing technology:: PacBio

IDs: 583701 [UID] 2685568 [GenBank] 2845298 [RefSeq]

See Genome Information for Hoylesella enoeca

Pathogen Detection Resources

There are 5 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_001444445.1	=	GCF_001444445.1	ASM144444v1	Complete Genome	Latest GenBank, Latest RefSeq

Comment

DNA and bacteria available from A. Kirega, A.C. Tanner, and F.E. Dewhirst Direct requests to the Human Oral Microbiome Project, The Forsyth Institute, 245 First Street, Cambridge, MA, 02142, USA.
The annotation was added by the NCBI Prokaryotic Genome Annotation ... Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/  more

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeq
Annotation Date::03/03/2024 07:50:23
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::2,466
CDSs (total)::2,400
Genes (coding)::2,354
CDSs (with protein)::2,354
Genes (RNA)::66
rRNAs::3, 3, 3 (5S, 16S, 23S)
complete rRNAs::3, 3, 3 (5S, 16S, 23S)
tRNAs::53
ncRNAs::4
Pseudo Genes (total)::46
CDSs (without protein)::46
Pseudo Genes (ambiguous residues)::0 of 46
Pseudo Genes (frameshifted)::11 of 46
Pseudo Genes (incomplete)::39 of 46
Pseudo Genes (internal stop)::9 of 46
Pseudo Genes (multiple problems)::10 of 46
CRISPR Arrays::1
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	2,861,432
Total ungapped length	2,861,432
Total number of chromosomes and plasmids	1

	ANI	Query coverage	Subject coverage
Declared type	99.96	97.22	99.93
Best-match type	99.96	97.22	99.93

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ASM144444v1

See Genome Information for Hoylesella enoeca

Pathogen Detection Resources

There are 5 assemblies for this organism

History (Show revision history)

Comment

Genome-Annotation-Data

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