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Source database (GenBank or RefSeq) File type

ASM131059v1

Anomalous assembly.

Organism name:

Bacillus sp. JCM 19035 (firmicutes)

Taxonomy check:

Failed

Infraspecific name:

Strain: JCM 19035

BioSample:

SAMD00000373

BioProject:

PRJDB1631

Submitter:

Microbe Division/JCM, RIKEN BioResource Center

Date:

2015/10/06

Assembly type:

Assembly level:

Contig

Genome representation:

full

Assembly anomaly:

unverified source organism

Excluded from RefSeq:

unverified source organism

GenBank assembly accession:

GCA_001310595.1 (latest)

RefSeq assembly accession:

GCF_001310595.1 (suppressed)

RefSeq assembly and GenBank assembly identical:

yes

WGS Project:

BAXP01

Assembly method:

Newbler v. 2.8

Genome coverage:

18x

Sequencing technology:

Ion PGM

IDs: 500611 [UID] 2387288 [GenBank] 2396258 [RefSeq]

Pathogen Detection Resources

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_001310595.1	=	GCF_001310595.1	ASM131059v1	Contig	Latest GenBank, RefSeq suppressed

Comment

This work had been advanced in the National BioResource Project(NBRP) supported by the Ministry of Education, Culture, Sports, Science and Technology of Japan(MEXT) as NBRP Genome Information Upgrading Program.
Source DNA and bacteria available from Microbe Division/JCM, RIKEN BioResource Center.
http://www.jcm.riken.go.jp/
Genome ... sequencing done by Center for Omics and Bioinformatics, Graduate School of Frontier Sciences, University of Tokyo. http://www.cb.k.u-tokyo.ac.jp/hattorilab/

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Global statistics

Total sequence length	4,329,788
Total ungapped length	4,329,788
Number of contigs	49
Contig N50	174,988
Contig L50	10
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	49

	ANI	Query coverage	Subject coverage
Declared type	na	na	na
Best-match type	97.90	92.69	91.73

Assembly

Genome Assembly

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ASM131059v1

Pathogen Detection Resources

History (Show revision history)

Comment

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Assembly Information

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Global assembly definition

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Taxonomy Check Data

Declared organism

Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

ANI result