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ASM106674v1

Organism name:
Morganella morganii (enterobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: 640_MMOR
BioSample:
SAMN03197841
BioProject:
PRJNA267549
Submitter:
University of Washington
Date:
2015/07/10
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_001066745.1 (latest)
RefSeq assembly accession:
GCF_001066745.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JUYZ01
Assembly method:
ABYSS v. 1.3.5
Genome coverage:
23x
Sequencing technology:
Illumina HiSeq

IDs: 370481 [UID] 1879138 [GenBank] 2010598 [RefSeq]

See Genome Information for Morganella morganii

There are 745 assemblies for this organism

See more

History (Show revision history)

Comment

Source DNA available from Steve Salipante, University of Washington Department of Laboratory Medicine, Box 357110, 1959 NE Pacific Street, NW120 Seattle, WA 98195-7110

Global statistics

Total sequence length3,972,497
Total ungapped length3,972,097
Gaps between scaffolds0
Number of scaffolds138
Scaffold N5092,760
Scaffold L5014
Number of contigs142
Contig N5092,760
Contig L5014
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)138

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,972,4971383,972,09792,76040

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Morganella morganiiMorganella morganii

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_006094455.1Morganella morganii subsp. morganiitype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_006094455.1Morganella morganiitype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.1090.8592.77
Best-match type99.1090.8592.77

ANI result

Taxonomy check statusBest match statusComment
OKderived-species-matchna