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Source database (GenBank or RefSeq) File type

ASM106171v1

Organism name:: Staphylococcus epidermidis (firmicutes)
Taxonomy check:: OK
Infraspecific name:: Strain: 100_SEPI
BioSample:: SAMN03196961
BioProject:: PRJNA267549
Submitter:: University of Washington
Date:: 2015/07/10
Assembly type:: na
Assembly level:: Contig
Genome representation:: full
GenBank assembly accession:: GCA_001061715.1 (latest)
RefSeq assembly accession:: GCF_001061715.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: JWGV01
Assembly method:: ABYSS v. 1.3.5
Genome coverage:: 25x
Sequencing technology:: Illumina HiSeq

IDs: 367961 [UID] 1874098 [GenBank] 2019098 [RefSeq]

See Genome Information for Staphylococcus epidermidis

Pathogen Detection Resources

There are 4822 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_001061715.1	=	GCF_001061715.1	ASM106171v1	Contig	Latest GenBank, Latest RefSeq

Comment

Source DNA available from Steve Salipante, University of Washington Department of Laboratory Medicine, Box 357110, 1959 NE Pacific Street, NW120 Seattle, WA 98195-7110

Global statistics

Total sequence length	2,702,163
Total ungapped length	2,702,163
Number of contigs	122
Contig N50	64,548
Contig L50	14
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	122

	ANI	Query coverage	Subject coverage
Declared type	99.57	85.90	94.52
Best-match type	99.57	85.90	94.52

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ASM106171v1

See Genome Information for Staphylococcus epidermidis

Pathogen Detection Resources

There are 4822 assemblies for this organism

History (Show revision history)

Comment

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Declared organism

Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

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