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Source database (GenBank or RefSeq) File type

ASM105575v1

Organism name:: Bacteroides thetaiotaomicron (CFB group bacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: 19_BTHE
BioSample:: SAMN03197381
BioProject:: PRJNA267549
Submitter:: University of Washington
Date:: 2015/07/10
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_001055755.1 (latest)
RefSeq assembly accession:: GCF_001055755.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: JVQR01
Assembly method:: ABYSS v. 1.3.5
Genome coverage:: 9x
Sequencing technology:: Illumina HiSeq

IDs: 364991 [UID] 1868158 [GenBank] 1891258 [RefSeq]

See Genome Information for Bacteroides thetaiotaomicron

Pathogen Detection Resources

There are 1125 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_001055755.1	=	GCF_001055755.1	ASM105575v1	Scaffold	Latest GenBank, Latest RefSeq

Comment

Source DNA available from Steve Salipante, University of Washington Department of Laboratory Medicine, Box 357110, 1959 NE Pacific Street, NW120 Seattle, WA 98195-7110

Global statistics

Total sequence length	6,359,255
Total ungapped length	6,359,042
Gaps between scaffolds	0
Number of scaffolds	351
Scaffold N50	42,751
Scaffold L50	46
Number of contigs	354
Contig N50	42,751
Contig L50	46
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	351

	ANI	Query coverage	Subject coverage
Declared type	98.43	79.56	80.39
Best-match type	98.43	79.56	80.39

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ASM105575v1

See Genome Information for Bacteroides thetaiotaomicron

Pathogen Detection Resources

There are 1125 assemblies for this organism

History (Show revision history)

Comment

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Assembly Information

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Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

ANI result