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ASM104722v1

Organism name:: Neisseria gonorrhoeae (b-proteobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: FA19
BioSample:: SAMN03459415
BioProject:: PRJNA278367
Submitter:: Centers for Disease Control and Prevention
Date:: 2015/07/07
Assembly type:: na
Assembly level:: Complete Genome
Genome representation:: full
GenBank assembly accession:: GCA_001047225.1 (latest)
RefSeq assembly accession:: GCF_001047225.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
Assembly method:: Prokka v. 1.11
Genome coverage:: 119
Sequencing technology:: PacBio

IDs: 360491 [UID] 1856148 [GenBank] 1861398 [RefSeq]

See Genome Information for Neisseria gonorrhoeae

Pathogen Detection Resources

There are 17557 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_001047225.1	=	GCF_001047225.1	ASM104722v1	Complete Genome	Latest GenBank, Latest RefSeq

Comment

The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
Bacteria available from Robert Nicholas (robert_nicholas@med.unc.edu).

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeq
Annotation Date::12/08/2023 04:22:31
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::2,352
CDSs (total)::2,281
Genes (coding)::2,026
CDSs (with protein)::2,026
Genes (RNA)::71
rRNAs::4, 4, 4 (5S, 16S, 23S)
complete rRNAs::4, 4, 4 (5S, 16S, 23S)
tRNAs::55
ncRNAs::4
Pseudo Genes (total)::255
CDSs (without protein)::255
Pseudo Genes (ambiguous residues)::0 of 255
Pseudo Genes (frameshifted)::128 of 255
Pseudo Genes (incomplete)::147 of 255
Pseudo Genes (internal stop)::43 of 255
Pseudo Genes (multiple problems)::59 of 255
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	2,232,367
Total ungapped length	2,232,367
Total number of chromosomes and plasmids	1

	ANI	Query coverage	Subject coverage
Declared type	99.62	95.22	99.22
Best-match type	99.62	95.22	99.22

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ASM104722v1

See Genome Information for Neisseria gonorrhoeae

Pathogen Detection Resources

There are 17557 assemblies for this organism

History (Show revision history)

Comment

Genome-Annotation-Data

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