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ASM103706v1

Organism name:
Pseudomonas aeruginosa (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: Pae_CF67.06n
BioSample:
SAMN03566338
BioProject:
PRJNA282164
Submitter:
University of Toronto
Date:
2015/06/22
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_001037065.1 (latest)
RefSeq assembly accession:
GCF_001037065.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LEFK01
Assembly method:
CLC NGS Cell v. 7
Expected final version:
yes
Genome coverage:
48.0x
Sequencing technology:
Illumina

IDs: 354671 [UID] 1827618 [GenBank] 1842018 [RefSeq]

See Genome Information for Pseudomonas aeruginosa

There are 30231 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length6,370,612
Total ungapped length6,342,329
Gaps between scaffolds0
Number of scaffolds241
Scaffold N5060,821
Scaffold L5032
Number of contigs753
Contig N5023,797
Contig L5085
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)241

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced6,370,6122416,342,32960,8215120

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Pseudomonas aeruginosaPseudomonas aeruginosa

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_001042925.1Pseudomonas aeruginosatype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_001042925.1Pseudomonas aeruginosatype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.2393.6294.42
Best-match type99.2393.6294.42

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna