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ASM99169v1

Organism name:
Candidatus Daviesbacteria bacterium GW2011_GWB1_36_5 (bacteria)
Taxonomy check:
Inconclusive
BioSample:
SAMN03319348
BioProject:
PRJNA273161
Submitter:
Banfield Lab, University of California, Berkeley
Date:
2015/05/07
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
  • genus undefined
GenBank assembly accession:
GCA_000991695.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
LBSA01
Assembly method:
idba_ud v. 1.1
Genome coverage:
5.15x
Sequencing technology:
Illumina HiSeq2000

IDs: 331691 [UID] 1756558 [GenBank]

See Genome Information for Candidatus Daviesbacteria bacterium GW2011_GWB1_36_5

History (Show revision history)

Comment

Global statistics

Total sequence length1,080,324
Total ungapped length1,080,164
Gaps between scaffolds0
Number of scaffolds55
Scaffold N5024,341
Scaffold L5015
Number of contigs61
Contig N5023,471
Contig L5015
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)55

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,080,324551,080,16424,34160

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Candidatus Daviesbacteria bacterium GW2011_GWB1_36_5Candidatus Daviesbacteria bacterium GW2011_GWB1_36_5

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
none-foundnana

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match typena0.000.00

ANI result

Taxonomy check statusBest match statusComment
Inconclusivenana