Format

Download Assemblies

Send to:

Choose Destination

M.pharaonis_V2.0

Organism name:
Monomorium pharaonis (pharaoh ant)
Isolate:
MPHARAONIS1.0.
BioSample:
SAMD00020277
BioProject:
PRJDB3164
Submitter:
Ecology and Evolution Unit at the Okinawa Institute of Science and Technology
Date:
2015/04/22
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000980195.3 (latest)
RefSeq assembly accession:
GCF_000980195.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
BBSX02
Assembly method:
Celera Assembler v. 8.2
Genome coverage:
40x
Sequencing technology:
Illumina HiSeq 2000

IDs: 343671 [UID] 1788828 [GenBank] 1789178 [RefSeq]

See Genome Information for Monomorium pharaonis

There are 3 assemblies for this organism

See more

History (Show revision history)

Global statistics

Total sequence length257,976,923
Total ungapped length257,381,140
Gaps between scaffolds0
Number of scaffolds12,136
Scaffold N5075,377
Scaffold L50891
Number of contigs23,133
Contig N5021,806
Contig L503,206
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)23,133

Supplemental Content

PubMed articles for this assembly

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced257,976,92312,136257,381,14075,37710,9970
Support Center