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M.pharaonis_V2.0

Organism name:
Monomorium pharaonis (pharaoh ant)
Isolate:
MPHARAONIS1.0.
BioSample:
SAMD00020277
BioProject:
PRJDB3164
Submitter:
Ecology and Evolution Unit at the Okinawa Institute of Science and Technology
Date:
2015/04/22
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000980195.2 (replaced)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
BBSX02
Assembly method:
Celera Assembler v. 8.2
Genome coverage:
40x
Sequencing technology:
Illumina HiSeq 2000

IDs: 325791 [UID] 1738638 [GenBank]

See Genome Information for Monomorium pharaonis

There are 3 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length262,305,054
Total ungapped length261,704,633
Gaps between scaffolds0
Number of scaffolds13,394
Scaffold N5073,835
Scaffold L50920
Number of contigs24,607
Contig N5021,277
Contig L503,304
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)24,607

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced262,305,05413,394261,704,63373,83511,2130
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