Sc_YJM195_v1

Organism name:: Saccharomyces cerevisiae YJM195 (brewer's yeast)
Infraspecific name:: Strain: YJM195
BioSample:: SAMN01923115
BioProject:: PRJNA189849
Submitter:: Duke University
Date:: 2016/07/29
Assembly level:: Chromosome
Genome representation:: full
GenBank assembly accession:: GCA_000975585.2 (latest)
RefSeq assembly accession:: n/a
RefSeq assembly and GenBank assembly identical:: n/a
Genome coverage:: 100x
Sequencing technology:: Illumina Hiseq, 100x100 bp paired-end reads

IDs: 1317581 [UID] 5314058 [GenBank]

See Genome Information for Saccharomyces cerevisiae

Pathogen Detection Resources

There are 1619 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000975585.2	n/a	n/a	Sc_YJM195_v1	Chromosome	Latest GenBank
GCA_000975585.1	n/a	n/a	Sc_YJM195_v1	Chromosome	Replaced GenBank

Comment

Global statistics

Total sequence length	12,752,445
Total ungapped length	12,742,145
Gaps between scaffolds	0
Number of scaffolds	17
Scaffold N50	916,102
Scaffold L50	5
Number of contigs	120
Contig N50	556,961
Contig L50	7
Total number of chromosomes and plasmids	17
Number of component sequences (WGS or clone)	17

Molecule name	GenBank sequence		RefSeq sequence
Chromosome I	CP004412.2	n/a	n/a
Chromosome II	CP004616.2	n/a	n/a
Chromosome III	CP006333.1	n/a	n/a
Chromosome IV	CP004662.2	n/a	n/a
Chromosome V	CP004756.2	n/a	n/a
Chromosome VI	CP004892.2	n/a	n/a
Chromosome VII	CP005196.2	n/a	n/a
Chromosome VIII	CP006121.2	n/a	n/a
Chromosome IX	CP004984.1	n/a	n/a
Chromosome X	CP005116.2	n/a	n/a
Chromosome XI	CP005293.2	n/a	n/a
Chromosome XII	CP006437.1	n/a	n/a
Chromosome XIII	CP005394.2	n/a	n/a
Chromosome XIV	CP005496.2	n/a	n/a
Chromosome XV	CP005590.2	n/a	n/a
Chromosome XVI	CP006213.1	n/a	n/a

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	12,673,484	16	12,663,184	916,102	103
Chromosome I	195,296	1	194,696	195,296	6
Chromosome II	779,223	1	779,223	779,223	0
Chromosome III	304,753	1	304,053	304,753	7
Chromosome IV	1,448,476	1	1,448,076	1,448,476	4
Chromosome V	576,943	1	576,543	576,943	4
Chromosome VI	269,675	1	269,475	269,675	2
Chromosome VII	1,050,786	1	1,049,986	1,050,786	8
Chromosome VIII	537,278	1	536,578	537,278	7
Chromosome IX	443,346	1	441,046	443,346	23
Chromosome X	720,831	1	720,331	720,831	5
Chromosome XI	670,394	1	670,194	670,394	2
Chromosome XII	2,069,293	1	2,068,593	2,069,293	7
Chromosome XIII	895,543	1	895,443	895,543	1
Chromosome XIV	758,913	1	758,513	758,913	4
Chromosome XV	1,036,632	1	1,036,532	1,036,632	1
Chromosome XVI	916,102	1	913,902	916,102	22

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Sc_YJM195_v1

See Genome Information for Saccharomyces cerevisiae

Pathogen Detection Resources

There are 1619 assemblies for this organism

History (Show revision history)

Comment

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Assembly Unit Name
Primary Assembly
non-nuclear