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Anan_2.0

Organism name:
Aotus nancymaae (Ma's night monkey)
Isolate:
86115
Sex:
female
BioSample:
SAMN03121886
BioProject:
PRJNA251539
Submitter:
Baylor College of Medicine
Date:
2017/06/09
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000952055.2 (latest)
RefSeq assembly accession:
GCF_000952055.2 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT (in non-nuclear assembly-unit)
  • Data displayed for RefSeq version
WGS Project:
JYKP02
Assembly method:
PBJelly2 v. 14.9.9; AllPathsLG v. 48744; Atlas Link v. 1.1; Atlas GapFill v. 2.2
Expected final version:
no
Genome coverage:
132.4x
Sequencing technology:
PacBio RSII; PacBio Sequel; Illumina

IDs: 1130511 [UID] 4593538 [GenBank] 4606798 [RefSeq]

See Genome Information for Aotus nancymaae

History (Show revision history)

Comment

Global statistics

Total sequence length2,861,684,817
Total ungapped length2,714,439,490
Gaps between scaffolds0
Number of scaffolds28,922
Scaffold N508,268,663
Scaffold L50102
Number of contigs112,851
Contig N50126,456
Contig L505,745
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)112,851

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,861,668,34828,9212,714,423,0218,268,66383,9290
MoleculeTotal
Length
Mitochondrion MT16,469
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