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Ppar_1.0

Organism name:
Apostichopus parvimensis (sea cucumbers)
Isolate:
Sea Cucumber 01
Sex:
male
BioSample:
SAMN03108597
BioProject:
PRJNA182998
Submitter:
Sea Urchin Genome Sequencing and Analysis Consortium
Date:
2015/02/27
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000934455.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JXUT01
Assembly method:
allpath-lg v. 41070; atlas-link v. 1.0; atlas-gapfill v. 2.0
Expected final version:
yes
Genome coverage:
339.0x
Sequencing technology:
Illumina

IDs: 301671 [UID] 1645148 [GenBank]

See Genome Information for Apostichopus parvimensis

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

Total sequence length873,088,235
Total ungapped length760,654,621
Gaps between scaffolds0
Number of scaffolds21,559
Scaffold N5089,133
Scaffold L502,945
Number of contigs150,862
Contig N509,587
Contig L5022,963
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)150,862

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
unplaced873,088,23521,559760,654,62189,133129,3030
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