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Hazt_1.0

Organism name:
Hyalella azteca (amphipods)
Isolate:
HAZT.00-mixed
BioSample:
SAMN02978968
BioProject:
PRJNA243935
Submitter:
Baylor College of Medicine
Date:
2014/10/06
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000764305.1 (replaced)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JQDR01
Assembly method:
AllPaths LG v. 48744; Atlas Link v. 1.0; Atlas GapFill v. 2.2
Expected final version:
yes
Genome coverage:
105.0x
Sequencing technology:
Illumina

IDs: 215941 [UID] 1350818 [GenBank]

See Genome Information for Hyalella azteca

History (Show revision history)

Global statistics

Total sequence length1,178,848,281
Total assembly gap length582,235,677
Gaps between scaffolds0
Number of scaffolds10,380
Scaffold N50987,977
Scaffold L50305
Number of contigs216,093
Contig N505,445
Contig L5027,283
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)216,093

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,178,848,28110,380596,612,604987,977205,7130
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