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Bger_1.0

  • Anomalous assembly.
Organism name:
Blattella germanica (German cockroach)
Infraspecific name:
Breed: German cockroach
Infraspecific name:
Strain: American Cyanamid = Orlando Normal
Sex:
male
BioSample:
SAMN02644979
BioProject:
PRJNA203136
Submitter:
The i5k Initiative
Date:
2014/10/02
Assembly level:
Scaffold
Genome representation:
full
Assembly anomaly:
contaminated
Excluded from RefSeq:
  • contaminated
GenBank assembly accession:
GCA_000762945.1 (replaced)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JPZV01
Assembly method:
AllPaths LG v. 44620; Atlas Link v. 1.0; Atlas GapFill v. 2.2
Expected final version:
yes
Genome coverage:
158.5x
Sequencing technology:
Illumina

IDs: 215261 [UID] 1341628 [GenBank]

See Genome Information for Blattella germanica

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,037,201,033
Total ungapped length1,710,331,465
Gaps between scaffolds0
Number of scaffolds24,792
Scaffold N501,056,071
Scaffold L50576
Number of contigs317,358
Contig N5012,125
Contig L5039,330
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)317,358

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,037,201,03324,7921,710,331,4651,056,071292,5660
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