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ASM71800v1

Organism name:
Actinoalloteichus caeruleus (high G+C Gram-positive bacteria)
Taxonomy check:
OK
Infraspecific name:
Culture-collection: NRRL:B-2194
Infraspecific name:
Strain: NRRL B-2194
BioSample:
SAMN02645219
BioProject:
PRJNA238534
Submitter:
University of Illinois
Date:
2014/07/02
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_000718005.1 (latest)
RefSeq assembly accession:
GCF_000718005.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JODV01
Assembly method:
IDBA UD v. 1.0.9
Genome coverage:
308x
Sequencing technology:
Illumina

IDs: 192161 [UID] 1157138 [GenBank] 1165188 [RefSeq]

See Genome Information for Actinoalloteichus caeruleus

There are 3 assemblies for this organism

See more

History (Show revision history)

Comment

Bacteria available from NRRL

Global statistics

Total sequence length6,026,369
Total ungapped length6,026,369
Number of contigs153
Contig N50320,749
Contig L507
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)153

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced6,026,3691536,026,369320,74900

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Actinoalloteichus caeruleusActinoalloteichus caeruleus

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000716095.1Actinoalloteichus caeruleustype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000716095.1Actinoalloteichus caeruleustype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9898.9499.45
Best-match type99.9898.9499.45

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna