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Plas_vinc_vinckei_V1

Organism name:
Plasmodium vinckei vinckei (apicomplexans)
Infraspecific name:
Strain: vinckei
BioSample:
SAMN00974095
BioProject:
PRJNA163123
Submitter:
Broad Institute
Date:
2014/06/17
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • superseded by newer assembly for species
GenBank assembly accession:
GCA_000709005.1 (latest)
RefSeq assembly accession:
GCF_000709005.1 (suppressed)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AMYS01
Assembly method:
allpaths v. R42649
Genome coverage:
136.0x
Sequencing technology:
Illumina

IDs: 187791 [UID] 1137438 [GenBank] 1181928 [RefSeq]

See Genome Information for Plasmodium vinckei

There are 10 assemblies for this organism

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History (Show revision history)

Comment

Please be aware that the annotation is done automatically with little or no manual curation.
The VEuPathDB Bioinformatics Resource Center (www.veupathdb.org) may also have contributed to the annotation of this genome. Annotation and related data can be viewed and updated ... at http://veupathdb.org and inquiries can be sent to help@veupathdb.org.  more

Global statistics

Total sequence length18,221,643
Total ungapped length17,857,611
Gaps between scaffolds0
Number of scaffolds49
Scaffold N501,653,377
Scaffold L505
Number of contigs349
Contig N50206,680
Contig L5024
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)349

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced18,221,6434917,857,6111,653,3773000
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