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Focc_1.0

Organism name:
Frankliniella occidentalis (western flower thrips)
Isolate:
FOCC.00
BioSample:
SAMN02303501
BioProject:
PRJNA203209
Submitter:
The i5k Initiative
Date:
2014/06/04
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000697945.1 (replaced)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JMDY01
Assembly method:
AllPaths LG v. 44620; Atlas Link v. 1.0; Atlas GapFill v. 2.2
Expected final version:
yes
Genome coverage:
158.7x
Sequencing technology:
Illumina

IDs: 182061 [UID] 1094538 [GenBank]

See Genome Information for Frankliniella occidentalis

History (Show revision history)

Global statistics

Total sequence length415,781,860
Total ungapped length263,783,419
Gaps between scaffolds0
Number of scaffolds6,263
Scaffold N50948,890
Scaffold L50102
Number of contigs76,021
Contig N506,159
Contig L5011,060
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)76,021

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced415,781,8606,263263,783,419948,89069,7580
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