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ASM62168v1

Organism name:
Legionella sainthelensi ATCC 35248 (g-proteobacteria)
Infraspecific name:
Strain: ATCC 35248
BioSample:
SAMN02744009
BioProject:
PRJNA223118
Submitter:
DOE Joint Genome Institute
Date:
2014/04/08
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_000621685.1 (latest)
RefSeq assembly accession:
GCF_000621685.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JHXP01
Assembly method:
vpAllpaths v. r46652
Genome coverage:
Unknown
Sequencing technology:
Illumina HiSeq 2000; Illumina

IDs: 141871 [UID] 994018 [GenBank] 1116568 [RefSeq]

See Genome Information for Legionella sainthelensi

There are 6 assemblies for this organism

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History (Show revision history)

Comment

URL -- http://www.jgi.doe.gov
JGI Project ID: 1024782
Source DNA and organism available from Tim Lilburn at the American Type Culture Collection (ATCC) (TLilburn@atcc.org)
Contacts: Nikos Kyrpides (nckyrpides@lbl.gov)
 Tanja Woyke (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI
Annotation by JGI
The JGI and collaborators ... endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376) 
Full annotations are available from IMG  more

Global statistics

Total sequence length4,108,235
Total ungapped length4,106,669
Gaps between scaffolds0
Number of scaffolds62
Scaffold N50147,819
Scaffold L5012
Number of contigs65
Contig N50147,819
Contig L5012
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)65

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced4,108,235624,106,669147,81930
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