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Lokhon

Organism name:
Limimaricola hongkongensis DSM 17492 (a-proteobacteria)
Infraspecific name:
Strain: DSM 17492
BioSample:
SAMN02951862
BioProject:
PRJNA183668
Submitter:
Leibniz Institute DSMZ Braunschweig
Date:
2014/04/02
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000600975.1 (replaced)
RefSeq assembly accession:
GCF_000600975.1 (replaced)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
APGJ01
Assembly method:
Velvet v. 1.0.18; Consed v. 20.0
Genome coverage:
132x
Sequencing technology:
SBS sequencing (Solexa Illumina); 454 GS-FLX

IDs: 164021 [UID] 1039078 [GenBank] 1439528 [RefSeq]

See Genome Information for Limimaricola hongkongensis

There are 2 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length3,198,444
Total ungapped length3,197,844
Gaps between scaffolds0
Number of scaffolds9
Scaffold N50750,699
Scaffold L502
Number of contigs10
Contig N50750,699
Contig L502
Total number of chromosomes and plasmids2
Number of component sequences (WGS or clone)10

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000600985.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Plasmid pLokhon01CM002675.1=NZ_CM002675.10
Plasmid pLokhon02CM002676.1=NZ_CM002676.10
unplacedn/an/an/a7

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All3,198,44493,197,844750,69910
Plasmid pLokhon0185,337185,33785,33700
Plasmid pLokhon02103,3671103,367103,36700
unplaced3,009,74073,009,140750,69910