Format

Download Assemblies

Send to:

Choose Destination

Tpre_1.0

Organism name:
Trichogramma pretiosum (wasps &c.)
Sex:
female
BioSample:
SAMN02439301
BioProject:
PRJNA168121
Submitter:
The i5k Initiative
Date:
2014/03/24
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000599845.2 (replaced)
RefSeq assembly accession:
GCF_000599845.1 (replaced)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JARR01
Assembly method:
AllPaths v. v44620; Atlas Link v. v1.0; Atlas GapFill v. v2.2
Expected final version:
yes
Genome coverage:
232.7x
Sequencing technology:
Illumina

IDs: 553061 [UID] 2498218 [GenBank] 2365458 [RefSeq]

See Genome Information for Trichogramma pretiosum

History (Show revision history)

Comment

A scaffold, and its component contigs, were removed in August 2015 because they represent a contaminant genome.

Global statistics

Total sequence length195,087,592
Total ungapped length180,028,424
Gaps between scaffolds0
Number of scaffolds357
Scaffold N503,706,225
Scaffold L5019
Number of contigs7,879
Contig N5078,655
Contig L50613
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)7,879

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced195,087,592357180,028,4243,706,2257,5220
Support Center