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R103

Organism name:
Saccharomyces cerevisiae R103 (baker's yeast)
Infraspecific name:
Strain: R103
BioSample:
SAMN01915093
BioProject:
PRJNA162715
Submitter:
University of Padova
Date:
2014/02/26
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_000568365.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
APIR01
Assembly method:
Newbler v. 2.3
Genome coverage:
14.0x
Sequencing technology:
454

IDs: 182731 [UID] 1104308 [GenBank]

See Genome Information for Saccharomyces cerevisiae

There are 788 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length11,489,728
Total ungapped length11,348,750
Gaps between scaffolds48
Number of scaffolds73
Scaffold N50375,263
Scaffold L5011
Number of contigs520
Contig N5039,234
Contig L5097
Total number of chromosomes and plasmids17
Number of component sequences (WGS or clone)516

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_000568375.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome ICM002438.1n/an/a0
Chromosome IICM002439.1n/an/a0
Chromosome IIICM002440.1n/an/a0
Chromosome IVCM002441.1n/an/a0
Chromosome VCM002442.1n/an/a0
Chromosome VICM002443.1n/an/a0
Chromosome VIICM002444.1n/an/a0
Chromosome VIIICM002445.1n/an/a0
Chromosome IXCM002446.1n/an/a0
Chromosome XCM002447.1n/an/a0
Chromosome XICM002448.1n/an/a0
Chromosome XIICM002449.1n/an/a0
Chromosome XIIICM002450.1n/an/a0
Chromosome XIVCM002451.1n/an/a0
Chromosome XVCM002452.1n/an/a0
Chromosome XVICM002453.1n/an/a0
Plasmid 2 micronn/an/an/a1
unplacedn/an/an/a8

Assembly statistics

MoleculeSequence RoleTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
AllAssembled molecule11,489,7287311,348,750375,26344748
Chromosome IAssembled molecule205,4001197,366205,40060
Chromosome IIAssembled molecule780,0245772,942176,235274
Chromosome IIIAssembled molecule299,3752294,428279,518121
Chromosome IVAssembled molecule1,458,25241,441,915889,816603
Chromosome VAssembled molecule552,5952549,152375,263201
Chromosome VIAssembled molecule232,1312230,889120,258111
Chromosome VIIAssembled molecule1,025,34881,016,670184,425437
Chromosome VIIIAssembled molecule471,6889462,915149,562148
Chromosome IXAssembled molecule424,3573400,989269,581182
Chromosome XAssembled molecule709,1895702,089485,702244
Chromosome XIAssembled molecule655,1183651,573512,067252
Chromosome XIIAssembled molecule990,2313981,673541,398382
Chromosome XIIIAssembled molecule910,1013906,908597,585302
Chromosome XIVAssembled molecule737,9275731,944178,877304
Chromosome XVAssembled molecule1,045,85621,035,749647,627541
Chromosome XVIAssembled molecule861,5537841,157153,173316
Plasmid 2 micronAllAssembled moleculeUnlocalized scaffolds2,14102,1411012,14102,1412,14102,141000000
unplacedAssembled molecule128,4428128,250111,11140
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