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Apha_asta_APO3_V1

Organism name:
Aphanomyces astaci (oomycetes)
Infraspecific name:
Strain: APO3
BioSample:
SAMN01906578
BioProject:
PRJNA187372
Submitter:
Broad Institute
Date:
2014/01/14
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000520075.1 (latest)
RefSeq assembly accession:
GCF_000520075.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
AYTG01
Assembly method:
allpaths v. R43602
Genome coverage:
107.0x
Sequencing technology:
Illumina

IDs: 93271 [UID] 894278 [GenBank] 1363158 [RefSeq]

See Genome Information for Aphanomyces astaci

There are 14 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length75,844,385
Total ungapped length58,572,286
Gaps between scaffolds0
Number of scaffolds835
Scaffold N50657,536
Scaffold L5031
Number of contigs4,659
Contig N5036,439
Contig L50421
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)4,659

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced75,844,38583558,572,286657,5363,8240
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