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Edan_1.0

Organism name:
Ephemera danica (mayflies)
Sex:
male
BioSample:
SAMN02264621
BioProject:
PRJNA171755
Submitter:
The i5k Initiative
Date:
2013/12/12
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000507165.1 (replaced)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
AYNC01
Assembly method:
AllPaths v. 35218; ATLAS-link v. 1.0; ATLAS-gapfill v. 2.2
Expected final version:
yes
Genome coverage:
207.7x
Sequencing technology:
Illumina HiSeq

IDs: 86111 [UID] 875628 [GenBank]

See Genome Information for Ephemera danica

History (Show revision history)

Global statistics

Total sequence length475,911,277
Total ungapped length399,547,496
Gaps between scaffolds0
Number of scaffolds9,036
Scaffold N50527,117
Scaffold L50261
Number of contigs81,798
Contig N5012,200
Contig L508,821
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)81,798

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced475,911,2779,036399,547,496527,11772,7620
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