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PhaVulg1_0

Organism name:
Phaseolus vulgaris (eudicots)
Infraspecific name:
Cultivar: G19833
BioSample:
SAMN02981484
BioProject:
PRJNA41439
Submitter:
JGI
Date:
2013/11/29
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000499845.1 (latest)
RefSeq assembly accession:
GCF_000499845.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ANNZ01
Assembly method:
ARACHNE v. 20071016_modfied
Genome coverage:
21.02X
Sequencing technology:
ABI 3730; Roche 454 FLX; Illumina GAII

IDs: 82691 [UID] 864298 [GenBank] 1011588 [RefSeq]

See Genome Information for Phaseolus vulgaris

There are 2 assemblies for this organism

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History (Show revision history)

Global statistics

Total sequence length521,076,696
Total ungapped length472,453,824
Gaps between scaffolds0
Number of scaffolds708
Scaffold N5050,367,376
Scaffold L505
Number of contigs41,568
Contig N5039,053
Contig L503,305
Total number of chromosomes and plasmids11
Number of component sequences (WGS or clone)41,568

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000499855.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1CM002288.1=NC_023759.10
Chromosome 2CM002289.1=NC_023758.10
Chromosome 3CM002290.1=NC_023757.10
Chromosome 4CM002291.1=NC_023756.10
Chromosome 5CM002292.1=NC_023755.10
Chromosome 6CM002293.1=NC_023754.10
Chromosome 7CM002294.1=NC_023753.10
Chromosome 8CM002295.1=NC_023752.10
Chromosome 9CM002296.1=NC_023751.10
Chromosome 10CM002297.1=NC_023750.10
Chromosome 11CM002298.1=NC_023749.10
unplacedn/an/an/a697

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All521,076,696708472,453,82450,367,37640,8600
Chromosome 152,205,531147,947,13452,205,5313,9690
Chromosome 249,040,938145,608,95049,040,9382,8500
Chromosome 352,284,309148,179,44752,284,3093,6050
Chromosome 445,960,019141,230,04945,960,0193,9750
Chromosome 540,819,286136,828,37240,819,2863,5600
Chromosome 631,977,256129,537,57431,977,2562,0650
Chromosome 751,758,522147,230,83051,758,5223,9820
Chromosome 859,662,532153,864,60059,662,5325,0930
Chromosome 937,469,608135,029,96637,469,6081,9790
Chromosome 1043,275,151138,128,84143,275,1514,1770
Chromosome 1150,367,376144,556,96650,367,3764,6940
unplaced6,256,1686974,311,09531,7219110
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