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EcoPMV1

Organism name:
Escherichia coli PMV-1 (E. coli)
Taxonomy check:
OK
Infraspecific name:
Strain: PMV-1
BioSample:
SAMEA2272347
BioProject:
PRJEB4437
Submitter:
ULB
Date:
2013/09/27
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
GenBank assembly accession:
GCA_000493595.1 (latest)
RefSeq assembly accession:
GCF_000493595.2 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CBTO01
Genome coverage:
26x

IDs: 360001 [UID] 850388 [GenBank] 1854838 [RefSeq]

See Genome Information for Escherichia coli

There are 274343 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length5,210,927
Total ungapped length5,210,927
Total number of chromosomes and plasmids4

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_000493605.2)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome HG428755.1=NC_022370.1
Plasmid pECOS88likeCBTO010000001.1=NZ_CBTO010000001.1
Plasmid pECOS88likeCBTO010000002.1=NZ_CBTO010000002.1
Plasmid pHUSEC411likeHG428756.1=NC_022371.1

Assembly statistics

MoleculeTotal
Length
All5,210,927
Chromosome 4,984,940
Plasmid pECOS88like83,288
Plasmid pECOS88like43,835
Plasmid pHUSEC411like98,864

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Escherichia coli PMV-1Escherichia coli

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000013265.1Escherichia coli UTI89claderef

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000013265.1Escherichia colicladeref

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.8694.3694.92
Best-match type99.8694.3694.92

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna