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Source database (GenBank or RefSeq) File type

CFSAN002367_1.0

Organism name:

Clostridium botulinum CFSAN002367 (firmicutes)

Taxonomy check:

Infraspecific name:

Strain: CFSAN002367

Isolate:

32A

BioSample:

SAMN01940924

BioProject:

PRJNA192664

Submitter:

FDA

Date:

2013/07/24

Assembly type:

Assembly level:

Contig

Genome representation:

full

Excluded from RefSeq:

many frameshifted proteins

GenBank assembly accession:

GCA_000439615.1 (latest)

RefSeq assembly accession:

GCF_000439615.1 (suppressed)

RefSeq assembly and GenBank assembly identical:

yes

WGS Project:

AQPT01

Assembly method:

Newbler v. 2.6

Expected final version:

Genome coverage:

26x

Sequencing technology:

IonTorrent

IDs: 45641 [UID] 746778 [GenBank] 800308 [RefSeq]

See Genome Information for Clostridium botulinum

Pathogen Detection Resources

There are 1430 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000439615.1	=	GCF_000439615.1	CFSAN002367_1.0	Contig	Latest GenBank, RefSeq suppressed

Comment

Genome was manually curated based on annotation generated by the NCBI Prokaryotic Genomes Automatic Annotation Pipeline Group. Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html.
Bacteria available from Dwayne Roberson, FDA College Park Campus, 5100 Paint Branch Parkway, College ... Park, MD 20740.  more

Global statistics

Total sequence length	3,873,962
Total ungapped length	3,873,962
Number of contigs	164
Contig N50	41,523
Contig L50	28
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	164

	ANI	Query coverage	Subject coverage
Declared type	99.26	93.56	93.20
Best-match type	99.26	93.56	93.20

Assembly

Genome Assembly

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Download Assembly

CFSAN002367_1.0

See Genome Information for Clostridium botulinum

Pathogen Detection Resources

There are 1430 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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Assembly Information

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Taxonomy Check Data

Declared organism

Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

ANI result