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URL -- http://www.jgi.doe.gov
JGI Project ID: 406743
Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)
Contacts: Nikos Kyrpides (nckyrpides@lbl.gov)
 Tanja Woyke (microbe@cuba.jgi-psf.org)
Whole genome sequencing and draft assembly at JGI-PGF
Annotation by JGI-PGF ... and JGI-ORNL
The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.
(http://www.genome.gov/page.cfm?pageID=10506376)
Full annotations are available from IMG  more

##MIGS-Data-START##
investigation_type::bacteria_archaea
project_name::Thiothrix disciformis DSM 14473
collection_date::Missing
lat_lon::Missing
depth::Missing
alt_elev::Missing
country::Japan
num_replicons::Missing
ref_biomaterial::DSM 14473
biotic_relationship::Free living
rel_to_oxygen::Missing
isol_growth_condt::12148645
assembly::ALLPATHS v. r41043
finishing_strategy::Missing
environment::Sludge; Wastewater; Host
trophic_level::Missing
sequencing_meth::WGS
GOLD Stamp ID::Gi12032
Current Finishing Status::Level 2: High-Quality Draft
Type Strain::Yes
Funding Program::DOE-CSP 2012
Gene Calling Method::Prodigal
Isolation Site::Bulking activated sludge of soy sauce factory wastewater treatment plant, Japan
Cell Shape::Rod-shaped
Temperature Range::Mesophile
Temperature Optimum::25 - 30
pH::7.0-7.9
Gram Staining::Gram-
Phenotypes::Catalase positive
##MIGS-Data-END##

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